Buch, Englisch, Band 2349, 385 Seiten, Format (B × H): 178 mm x 254 mm, Gewicht: 750 g
Reihe: Methods in Molecular Biology
Methods and Protocols
Buch, Englisch, Band 2349, 385 Seiten, Format (B × H): 178 mm x 254 mm, Gewicht: 750 g
Reihe: Methods in Molecular Biology
ISBN: 978-1-0716-1587-4
Verlag: Springer US
This second edition provides new and updated chapters describing the utility and attributes of different tools that are used for studying microbial systems. Chapters detail a number of methods, including in silico system level analyses by MetaFlux, Kbase genome-scale model builder, COBRA toolbox, NanoSIP, and PAMMS. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.
Authoritative and cutting-edge, Microbial Systems Biology: Methods and Protocols, Second Edition aims to introduce and aid scientists in using the various tools that are currently available for analysis, modification, and utilization of microbial organisms.
Zielgruppe
Professional/practitioner
Autoren/Hrsg.
Fachgebiete
Weitere Infos & Material
1. Parallel Accelerator and Molecular Mass Spectrometry Measurement of Carbon-14 Labeled Analytes
Benjamin J. Stewart and Ted J. Ognibene
2. Fast sampling of the cellular metabolome
Walter M. van Gulik, Andre B. Canelas, Hilal Taymaz-Nikerel, Rutger D. Douma, Lodewijk P. de Jonge, and Joseph J. Heijnen
3. Investigation of Protein-Lipid Interactions Using Native Mass Spectrometry
Xiao Cong, John W. Patrick, Yang Liu, Xiaowen Liang, Wen Liu, and Arthur Laganowsky
4. Western Blot Processing Optimization: The Perfect Blot.
Russ Yukhananov, David P. Chimento, and Laura A. Marlow
5. FISHing on a Budget
Gable M. Wadsworth and Harold D. Kim
6. NanoSIP: NanoSIMS Applications for Microbial Biology
Jennifer Pett-Ridge and Peter K. Weber
7. Construction of Metatranscriptomic Libraries for 5' end Sequencing of rRNAs for Microbiome Research
Marja Tiirola and Anita Mäki
8. Computational Approaches for Designing Highly Specific and Efficient sgRNAsJaspreet Kaur Dhanjal, Dhvani Vora, Navaneethan Radhakrishnan, and Durai Sundar
9. Complex Network Analysis in Microbial Systems: Theory and Examples
André Voigt and Eivind Almaas10. Prokaryotic Genome Annotation
Jeffrey A. Kimbrel, Brendan M. Jeffrey, and Christopher S. Ward
11. Functional Annotation from Structural Homology
Brent W. Segelke
12. Metabolic Modeling with MetaFlux
Mario Latendresse, Wai Kit Ong, and Peter D. Karp
13. Application of the Metabolic Modeling Pipeline in KBase to Categorize Reactions, Predict Essential Genes, And Predict Pathways in an Isolate Genome
Benjamin H. Allen, Nidhi Gupta, Janaka N. Edirisinghe, José P. Faria, and Christopher S. Henry
14. Curating COBRA Models of Microbial MetabolismAli Navid
15. A Beginner’s Guide to the COBRA Toolbox
Ali Navid
16. Rules of Engagement: A Guide to Developing Agent-Based Models
Marc Griesemer and Suzanne S. Sindi
